add database migration tooling with alembic

pdm.lock

@@ -5,7 +5,7 @@
 groups = ["default", "dev", "lint", "nb", "tests"]
 strategy = ["inherit_metadata"]
 lock_version = "4.5.0"
-content_hash = "sha256:25812ee6ba42033e1341c1799716828d8582092826c1d0889ea775a0f5c548a2"
+content_hash = "sha256:bde2f66706034b9c34c6794bf192b44db6e116a287938d88c90c751a2666bdf7"
 
 [[metadata.targets]]
 requires_python = ">=3.11,<3.14"
@@ -152,6 +152,23 @@ files = [
     {file = "aiosignal-1.4.0.tar.gz", hash = "sha256:f47eecd9468083c2029cc99945502cb7708b082c232f9aca65da147157b251c7"},
 ]
 
+[[package]]
+name = "alembic"
+version = "1.18.4"
+requires_python = ">=3.10"
+summary = "A database migration tool for SQLAlchemy."
+groups = ["default"]
+dependencies = [
+    "Mako",
+    "SQLAlchemy>=1.4.23",
+    "tomli; python_version < \"3.11\"",
+    "typing-extensions>=4.12",
+]
+files = [
+    {file = "alembic-1.18.4-py3-none-any.whl", hash = "sha256:a5ed4adcf6d8a4cb575f3d759f071b03cd6e5c7618eb796cb52497be25bfe19a"},
+    {file = "alembic-1.18.4.tar.gz", hash = "sha256:cb6e1fd84b6174ab8dbb2329f86d631ba9559dd78df550b57804d607672cedbc"},
+]
+
 [[package]]
 name = "annotated-doc"
 version = "0.0.4"
@@ -1845,7 +1862,7 @@ name = "mako"
 version = "1.3.11"
 requires_python = ">=3.8"
 summary = "A super-fast templating language that borrows the best ideas from the existing templating languages."
-groups = ["dev"]
+groups = ["default", "dev"]
 dependencies = [
     "MarkupSafe>=0.9.2",
 ]
@@ -1895,7 +1912,7 @@ name = "markupsafe"
 version = "3.0.3"
 requires_python = ">=3.9"
 summary = "Safely add untrusted strings to HTML/XML markup."
-groups = ["dev", "nb"]
+groups = ["default", "dev", "nb"]
 files = [
     {file = "markupsafe-3.0.3-cp311-cp311-macosx_10_9_x86_64.whl", hash = "sha256:1cc7ea17a6824959616c525620e387f6dd30fec8cb44f649e31712db02123dad"},
     {file = "markupsafe-3.0.3-cp311-cp311-macosx_11_0_arm64.whl", hash = "sha256:4bd4cd07944443f5a265608cc6aab442e4f74dff8088b0dfc8238647b8f6ae9a"},