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<h2 class="section-title" id="header-submodules">Sub-modules</h2>
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<dt><code class="name"><a title="lang_main.analysis.graphs" href="graphs.html">lang_main.analysis.graphs</a></code></dt>
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<div class="desc"></div>
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<li><h3>Super-module</h3>
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<li><code><a title="lang_main" href="../index.html">lang_main</a></code></li>
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<li><code><a title="lang_main.analysis.graphs" href="graphs.html">lang_main.analysis.graphs</a></code></li>
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<li><code><a title="lang_main.analysis.preprocessing" href="preprocessing.html">lang_main.analysis.preprocessing</a></code></li>
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docs/lang_main/analysis/preprocessing.html
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</header>
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<section id="section-intro">
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</section>
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<section>
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</section>
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<section>
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</section>
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<section>
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<h2 class="section-title" id="header-functions">Functions</h2>
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<dl>
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<dt id="lang_main.analysis.preprocessing.analyse_feature"><code class="name flex">
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<span>def <span class="ident">analyse_feature</span></span>(<span>data: DataFrame, target_feature: str) ‑> tuple[pandas.core.frame.DataFrame]</span>
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</code></dt>
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<dd>
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<details class="source">
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<summary>
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<span>Expand source code</span>
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</summary>
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<pre><code class="python">def analyse_feature(
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data: DataFrame,
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target_feature: str,
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) -> tuple[DataFrame]:
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# feature columns
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feature_entries = data[target_feature]
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logger.info(
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'Number of entries for feature >>%s<<: %d', target_feature, len(feature_entries)
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)
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# obtain unique entries
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unique_feature_entries = feature_entries.unique()
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# prepare result DataFrame
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cols = ['batched_idxs', 'entry', 'len', 'num_occur', 'assoc_obj_ids', 'num_assoc_obj_ids']
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result_df = pd.DataFrame(columns=cols)
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for entry in tqdm(unique_feature_entries, mininterval=1.0):
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len_entry = len(entry)
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filt = data[target_feature] == entry
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temp = data[filt]
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batched_idxs = temp.index.to_numpy()
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assoc_obj_ids = temp['ObjektID'].unique()
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assoc_obj_ids = np.sort(assoc_obj_ids, kind='stable')
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num_assoc_obj_ids = len(assoc_obj_ids)
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num_dupl = filt.sum()
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conc_df = pd.DataFrame(
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data=[
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[batched_idxs, entry, len_entry, num_dupl, assoc_obj_ids, num_assoc_obj_ids]
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],
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columns=cols,
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)
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result_df = pd.concat([result_df, conc_df], ignore_index=True)
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result_df = result_df.sort_values(
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by=['num_occur', 'len'], ascending=[False, False]
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).copy()
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return (result_df,)</code></pre>
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</details>
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<div class="desc"></div>
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</dd>
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<dt id="lang_main.analysis.preprocessing.load_raw_data"><code class="name flex">
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<span>def <span class="ident">load_raw_data</span></span>(<span>path: Path,<br>date_cols: Collection[str] = ('VorgangsDatum', 'ErledigungsDatum', 'Arbeitsbeginn', 'ErstellungsDatum')) ‑> tuple[pandas.core.frame.DataFrame]</span>
|
||||
</code></dt>
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<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def load_raw_data(
|
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path: Path,
|
||||
date_cols: Collection[str] = (
|
||||
'VorgangsDatum',
|
||||
'ErledigungsDatum',
|
||||
'Arbeitsbeginn',
|
||||
'ErstellungsDatum',
|
||||
),
|
||||
) -> tuple[DataFrame]:
|
||||
"""load IHM dataset with standard structure
|
||||
|
||||
Parameters
|
||||
----------
|
||||
path : str
|
||||
path to dataset file, usually CSV file
|
||||
date_cols : Collection[str], optional
|
||||
columns which contain dates and are parsed as such,
|
||||
by default (
|
||||
'VorgangsDatum',
|
||||
'ErledigungsDatum',
|
||||
'Arbeitsbeginn',
|
||||
'ErstellungsDatum',
|
||||
)
|
||||
|
||||
Returns
|
||||
-------
|
||||
DataFrame
|
||||
raw dataset as DataFrame
|
||||
"""
|
||||
# load dataset
|
||||
date_cols = list(date_cols)
|
||||
data = pd.read_csv(
|
||||
filepath_or_buffer=path,
|
||||
sep=';',
|
||||
encoding='cp1252',
|
||||
parse_dates=list(date_cols),
|
||||
dayfirst=True,
|
||||
)
|
||||
logger.info('Loaded dataset successfully.')
|
||||
logger.info(
|
||||
(
|
||||
f'Dataset properties: number of entries: {len(data)}, '
|
||||
f'number of features {len(data.columns)}'
|
||||
)
|
||||
)
|
||||
return (data,)</code></pre>
|
||||
</details>
|
||||
<div class="desc"><p>load IHM dataset with standard structure</p>
|
||||
<h2 id="parameters">Parameters</h2>
|
||||
<dl>
|
||||
<dt><strong><code>path</code></strong> : <code>str</code></dt>
|
||||
<dd>path to dataset file, usually CSV file</dd>
|
||||
<dt><strong><code>date_cols</code></strong> : <code>Collection[str]</code>, optional</dt>
|
||||
<dd>columns which contain dates and are parsed as such,
|
||||
by default (
|
||||
'VorgangsDatum',
|
||||
'ErledigungsDatum',
|
||||
'Arbeitsbeginn',
|
||||
'ErstellungsDatum',
|
||||
)</dd>
|
||||
</dl>
|
||||
<h2 id="returns">Returns</h2>
|
||||
<dl>
|
||||
<dt><code>DataFrame</code></dt>
|
||||
<dd>raw dataset as DataFrame</dd>
|
||||
</dl></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.preprocessing.merge_similarity_duplicates"><code class="name flex">
|
||||
<span>def <span class="ident">merge_similarity_duplicates</span></span>(<span>data: DataFrame, model: SentenceTransformer, cos_sim_threshold: float) ‑> tuple[pandas.core.frame.DataFrame]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def merge_similarity_duplicates(
|
||||
data: DataFrame,
|
||||
model: SentenceTransformer,
|
||||
cos_sim_threshold: float,
|
||||
) -> tuple[DataFrame]:
|
||||
logger.info('Start merging of similarity candidates...')
|
||||
|
||||
# data
|
||||
merged_data = data.copy()
|
||||
model_input = merged_data['entry']
|
||||
candidates_idx = candidates_by_index(
|
||||
data_model_input=model_input,
|
||||
model=model,
|
||||
cos_sim_threshold=cos_sim_threshold,
|
||||
)
|
||||
# graph of similar ids
|
||||
similar_id_graph, _ = similar_index_connection_graph(candidates_idx)
|
||||
|
||||
for similar_id_group in similar_index_groups(similar_id_graph):
|
||||
similar_id_group = list(similar_id_group)
|
||||
similar_data = merged_data.loc[similar_id_group, :]
|
||||
# keep first entry with max number occurrences, then number of
|
||||
# associated objects, then length of entry
|
||||
similar_data = similar_data.sort_values(
|
||||
by=['num_occur', 'num_assoc_obj_ids', 'len'],
|
||||
ascending=[False, False, False],
|
||||
)
|
||||
# merge information to first entry
|
||||
data_idx = cast(PandasIndex, similar_data.index[0])
|
||||
similar_data.at[data_idx, 'num_occur'] = similar_data['num_occur'].sum()
|
||||
assoc_obj_ids = similar_data['assoc_obj_ids'].to_numpy()
|
||||
assoc_obj_ids = np.concatenate(assoc_obj_ids)
|
||||
assoc_obj_ids = np.unique(assoc_obj_ids)
|
||||
similar_data.at[data_idx, 'assoc_obj_ids'] = assoc_obj_ids
|
||||
similar_data.at[data_idx, 'num_assoc_obj_ids'] = len(assoc_obj_ids)
|
||||
# remaining indices, should be removed
|
||||
similar_id_group.remove(data_idx)
|
||||
merged_similar_data = similar_data.drop(index=similar_id_group)
|
||||
# update entry in main dataset, drop remaining entries
|
||||
merged_data.update(merged_similar_data)
|
||||
merged_data = merged_data.drop(index=similar_id_group)
|
||||
|
||||
logger.info('Similarity candidates merged successfully.')
|
||||
|
||||
return (merged_data,)</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.preprocessing.numeric_pre_filter_feature"><code class="name flex">
|
||||
<span>def <span class="ident">numeric_pre_filter_feature</span></span>(<span>data: DataFrame, feature: str, bound_lower: int | None, bound_upper: int | None) ‑> tuple[pandas.core.frame.DataFrame]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def numeric_pre_filter_feature(
|
||||
data: DataFrame,
|
||||
feature: str,
|
||||
bound_lower: int | None,
|
||||
bound_upper: int | None,
|
||||
) -> tuple[DataFrame]:
|
||||
"""filter DataFrame for a given numerical feature regarding their bounds
|
||||
bounds are inclusive: entries (bound_lower <= entry <= bound_upper) are retained
|
||||
|
||||
Parameters
|
||||
----------
|
||||
data : DataFrame
|
||||
DataFrame to filter
|
||||
feature : str
|
||||
feature name to filter
|
||||
bound_lower : int | None
|
||||
lower bound of values to retain
|
||||
bound_upper : int | None
|
||||
upper bound of values to retain
|
||||
|
||||
Returns
|
||||
-------
|
||||
tuple[DataFrame]
|
||||
filtered DataFrame
|
||||
|
||||
Raises
|
||||
------
|
||||
ValueError
|
||||
if no bounds are provided, at least one bound must be set
|
||||
"""
|
||||
if not any([bound_lower, bound_upper]):
|
||||
raise ValueError('No bounds for filtering provided')
|
||||
|
||||
data = data.copy()
|
||||
if bound_lower is None:
|
||||
bound_lower = cast(int, data[feature].min())
|
||||
if bound_upper is None:
|
||||
bound_upper = cast(int, data[feature].max())
|
||||
|
||||
filter_lower = data[feature] >= bound_lower
|
||||
filter_upper = data[feature] <= bound_upper
|
||||
filter = filter_lower & filter_upper
|
||||
|
||||
data = data.loc[filter]
|
||||
|
||||
return (data,)</code></pre>
|
||||
</details>
|
||||
<div class="desc"><p>filter DataFrame for a given numerical feature regarding their bounds
|
||||
bounds are inclusive: entries (bound_lower <= entry <= bound_upper) are retained</p>
|
||||
<h2 id="parameters">Parameters</h2>
|
||||
<dl>
|
||||
<dt><strong><code>data</code></strong> : <code>DataFrame</code></dt>
|
||||
<dd>DataFrame to filter</dd>
|
||||
<dt><strong><code>feature</code></strong> : <code>str</code></dt>
|
||||
<dd>feature name to filter</dd>
|
||||
<dt><strong><code>bound_lower</code></strong> : <code>int | None</code></dt>
|
||||
<dd>lower bound of values to retain</dd>
|
||||
<dt><strong><code>bound_upper</code></strong> : <code>int | None</code></dt>
|
||||
<dd>upper bound of values to retain</dd>
|
||||
</dl>
|
||||
<h2 id="returns">Returns</h2>
|
||||
<dl>
|
||||
<dt><code>tuple[DataFrame]</code></dt>
|
||||
<dd>filtered DataFrame</dd>
|
||||
</dl>
|
||||
<h2 id="raises">Raises</h2>
|
||||
<dl>
|
||||
<dt><code>ValueError</code></dt>
|
||||
<dd>if no bounds are provided, at least one bound must be set</dd>
|
||||
</dl></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.preprocessing.remove_NA"><code class="name flex">
|
||||
<span>def <span class="ident">remove_NA</span></span>(<span>data: DataFrame, target_features: Collection[str] = ('VorgangsBeschreibung',)) ‑> tuple[pandas.core.frame.DataFrame]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def remove_NA(
|
||||
data: DataFrame,
|
||||
target_features: Collection[str] = ('VorgangsBeschreibung',),
|
||||
) -> tuple[DataFrame]:
|
||||
"""function to drop NA entries based on a subset of features to be analysed
|
||||
|
||||
Parameters
|
||||
----------
|
||||
data : DataFrame
|
||||
standard IHM dataset, perhaps pre-cleaned
|
||||
target_features : Collection[str], optional
|
||||
subset to analyse to define an NA entry, by default ('VorgangsBeschreibung',)
|
||||
|
||||
Returns
|
||||
-------
|
||||
DataFrame
|
||||
dataset with removed NA entries for given subset of features
|
||||
"""
|
||||
target_features = list(target_features)
|
||||
wo_NA = data.dropna(axis=0, subset=target_features, ignore_index=True).copy() # type: ignore
|
||||
logger.info(
|
||||
f'Removed NA entries for features >>{target_features}<< from dataset successfully.'
|
||||
)
|
||||
|
||||
return (wo_NA,)</code></pre>
|
||||
</details>
|
||||
<div class="desc"><p>function to drop NA entries based on a subset of features to be analysed</p>
|
||||
<h2 id="parameters">Parameters</h2>
|
||||
<dl>
|
||||
<dt><strong><code>data</code></strong> : <code>DataFrame</code></dt>
|
||||
<dd>standard IHM dataset, perhaps pre-cleaned</dd>
|
||||
<dt><strong><code>target_features</code></strong> : <code>Collection[str]</code>, optional</dt>
|
||||
<dd>subset to analyse to define an NA entry, by default ('VorgangsBeschreibung',)</dd>
|
||||
</dl>
|
||||
<h2 id="returns">Returns</h2>
|
||||
<dl>
|
||||
<dt><code>DataFrame</code></dt>
|
||||
<dd>dataset with removed NA entries for given subset of features</dd>
|
||||
</dl></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.preprocessing.remove_duplicates"><code class="name flex">
|
||||
<span>def <span class="ident">remove_duplicates</span></span>(<span>data: DataFrame) ‑> tuple[pandas.core.frame.DataFrame]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def remove_duplicates(
|
||||
data: DataFrame,
|
||||
) -> tuple[DataFrame]:
|
||||
"""removes duplicated entries over all features in the given dataset
|
||||
|
||||
Parameters
|
||||
----------
|
||||
data : DataFrame
|
||||
read data with standard structure
|
||||
|
||||
Returns
|
||||
-------
|
||||
DataFrame
|
||||
dataset with removed duplicates over all features
|
||||
"""
|
||||
# obtain info about duplicates over all features
|
||||
duplicates_filt = data.duplicated()
|
||||
logger.info(f'Number of duplicates over all features: {duplicates_filt.sum()}')
|
||||
# drop duplicates
|
||||
wo_duplicates = data.drop_duplicates(ignore_index=True)
|
||||
duplicates_subset: list[str] = [
|
||||
'VorgangsID',
|
||||
'ObjektID',
|
||||
]
|
||||
duplicates_subset_filt = wo_duplicates.duplicated(subset=duplicates_subset)
|
||||
logger.info(
|
||||
(
|
||||
'Number of duplicates over subset '
|
||||
f'>>{duplicates_subset}<<: {duplicates_subset_filt.sum()}'
|
||||
)
|
||||
)
|
||||
wo_duplicates = wo_duplicates.drop_duplicates(
|
||||
subset=duplicates_subset, ignore_index=True
|
||||
).copy()
|
||||
logger.info('Removed all duplicates from dataset successfully.')
|
||||
logger.info(
|
||||
'New Dataset properties: number of entries: %d, number of features %d',
|
||||
len(wo_duplicates),
|
||||
len(wo_duplicates.columns),
|
||||
)
|
||||
|
||||
return (wo_duplicates,)</code></pre>
|
||||
</details>
|
||||
<div class="desc"><p>removes duplicated entries over all features in the given dataset</p>
|
||||
<h2 id="parameters">Parameters</h2>
|
||||
<dl>
|
||||
<dt><strong><code>data</code></strong> : <code>DataFrame</code></dt>
|
||||
<dd>read data with standard structure</dd>
|
||||
</dl>
|
||||
<h2 id="returns">Returns</h2>
|
||||
<dl>
|
||||
<dt><code>DataFrame</code></dt>
|
||||
<dd>dataset with removed duplicates over all features</dd>
|
||||
</dl></div>
|
||||
</dd>
|
||||
</dl>
|
||||
</section>
|
||||
<section>
|
||||
</section>
|
||||
</article>
|
||||
<nav id="sidebar">
|
||||
<div class="toc">
|
||||
<ul></ul>
|
||||
</div>
|
||||
<ul id="index">
|
||||
<li><h3>Super-module</h3>
|
||||
<ul>
|
||||
<li><code><a title="lang_main.analysis" href="index.html">lang_main.analysis</a></code></li>
|
||||
</ul>
|
||||
</li>
|
||||
<li><h3><a href="#header-functions">Functions</a></h3>
|
||||
<ul class="">
|
||||
<li><code><a title="lang_main.analysis.preprocessing.analyse_feature" href="#lang_main.analysis.preprocessing.analyse_feature">analyse_feature</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.preprocessing.load_raw_data" href="#lang_main.analysis.preprocessing.load_raw_data">load_raw_data</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.preprocessing.merge_similarity_duplicates" href="#lang_main.analysis.preprocessing.merge_similarity_duplicates">merge_similarity_duplicates</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.preprocessing.numeric_pre_filter_feature" href="#lang_main.analysis.preprocessing.numeric_pre_filter_feature">numeric_pre_filter_feature</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.preprocessing.remove_NA" href="#lang_main.analysis.preprocessing.remove_NA">remove_NA</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.preprocessing.remove_duplicates" href="#lang_main.analysis.preprocessing.remove_duplicates">remove_duplicates</a></code></li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
</nav>
|
||||
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<article id="content">
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<header>
|
||||
<h1 class="title">Module <code>lang_main.analysis.shared</code></h1>
|
||||
</header>
|
||||
<section id="section-intro">
|
||||
</section>
|
||||
<section>
|
||||
</section>
|
||||
<section>
|
||||
</section>
|
||||
<section>
|
||||
<h2 class="section-title" id="header-functions">Functions</h2>
|
||||
<dl>
|
||||
<dt id="lang_main.analysis.shared.candidates_by_index"><code class="name flex">
|
||||
<span>def <span class="ident">candidates_by_index</span></span>(<span>data_model_input: pandas.core.series.Series,<br>model: sentence_transformers.SentenceTransformer.SentenceTransformer,<br>cos_sim_threshold: float = 0.5) ‑> Iterator[tuple[int | numpy.int64, int | numpy.int64]]</span>
|
||||
</code></dt>
|
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<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def candidates_by_index(
|
||||
data_model_input: Series,
|
||||
model: SentenceTransformer,
|
||||
cos_sim_threshold: float = 0.5,
|
||||
) -> Iterator[tuple[PandasIndex, PandasIndex]]:
|
||||
"""function to filter candidate indices based on cosine similarity
|
||||
using SentenceTransformer model in batch mode,
|
||||
feed data as Series to retain information about indices of entries and
|
||||
access them later in the original dataset
|
||||
|
||||
Parameters
|
||||
----------
|
||||
obj_id : ObjectID
|
||||
_description_
|
||||
data_model_input : Series
|
||||
containing indices and text entries to process
|
||||
model : SentenceTransformer
|
||||
necessary SentenceTransformer model to encode text entries
|
||||
cos_sim_threshold : float, optional
|
||||
threshold for cosine similarity to filter candidates, by default 0.5
|
||||
|
||||
Yields
|
||||
------
|
||||
Iterator[tuple[PandasIndex, PandasIndex]]
|
||||
tuple of index pairs which meet the cosine similarity threshold
|
||||
"""
|
||||
# embeddings
|
||||
batch = cast(list[str], data_model_input.to_list())
|
||||
embds = cast(
|
||||
Tensor,
|
||||
model.encode(
|
||||
batch,
|
||||
convert_to_numpy=False,
|
||||
convert_to_tensor=True,
|
||||
show_progress_bar=False,
|
||||
),
|
||||
)
|
||||
# cosine similarity
|
||||
cos_sim = cast(npt.NDArray, model.similarity(embds, embds).numpy())
|
||||
np.fill_diagonal(cos_sim, 0.0)
|
||||
cos_sim = np.triu(cos_sim)
|
||||
cos_sim_idx = np.argwhere(cos_sim >= cos_sim_threshold)
|
||||
|
||||
for idx_array in cos_sim_idx:
|
||||
idx_pair = cast(
|
||||
tuple[np.int64, np.int64], tuple(data_model_input.index[idx] for idx in idx_array)
|
||||
)
|
||||
yield idx_pair</code></pre>
|
||||
</details>
|
||||
<div class="desc"><p>function to filter candidate indices based on cosine similarity
|
||||
using SentenceTransformer model in batch mode,
|
||||
feed data as Series to retain information about indices of entries and
|
||||
access them later in the original dataset</p>
|
||||
<h2 id="parameters">Parameters</h2>
|
||||
<dl>
|
||||
<dt><strong><code>obj_id</code></strong> : <code>ObjectID</code></dt>
|
||||
<dd><em>description</em></dd>
|
||||
<dt><strong><code>data_model_input</code></strong> : <code>Series</code></dt>
|
||||
<dd>containing indices and text entries to process</dd>
|
||||
<dt><strong><code>model</code></strong> : <code>SentenceTransformer</code></dt>
|
||||
<dd>necessary SentenceTransformer model to encode text entries</dd>
|
||||
<dt><strong><code>cos_sim_threshold</code></strong> : <code>float</code>, optional</dt>
|
||||
<dd>threshold for cosine similarity to filter candidates, by default 0.5</dd>
|
||||
</dl>
|
||||
<h2 id="yields">Yields</h2>
|
||||
<dl>
|
||||
<dt><code>Iterator[tuple[PandasIndex, PandasIndex]]</code></dt>
|
||||
<dd>tuple of index pairs which meet the cosine similarity threshold</dd>
|
||||
</dl></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.shared.clean_string_slim"><code class="name flex">
|
||||
<span>def <span class="ident">clean_string_slim</span></span>(<span>string: str) ‑> str</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def clean_string_slim(string: str) -> str:
|
||||
"""mapping function to clean single string entries in a series (feature-wise)
|
||||
of the dataset, used to be applied element-wise for string features
|
||||
|
||||
Parameters
|
||||
----------
|
||||
string : str
|
||||
dataset entry feature
|
||||
|
||||
Returns
|
||||
-------
|
||||
str
|
||||
cleaned entry
|
||||
"""
|
||||
# remove special chars
|
||||
# string = pattern_escape_newline.sub(' ', string)
|
||||
string = pattern_escape_seq.sub(' ', string)
|
||||
string = pattern_repeated_chars.sub('', string)
|
||||
# string = pattern_dates.sub('', string)
|
||||
# dates are used for context, should not be removed at this stage
|
||||
string = pattern_whitespace.sub(' ', string)
|
||||
# remove whitespaces at the beginning and the end
|
||||
string = string.strip()
|
||||
|
||||
return string</code></pre>
|
||||
</details>
|
||||
<div class="desc"><p>mapping function to clean single string entries in a series (feature-wise)
|
||||
of the dataset, used to be applied element-wise for string features</p>
|
||||
<h2 id="parameters">Parameters</h2>
|
||||
<dl>
|
||||
<dt><strong><code>string</code></strong> : <code>str</code></dt>
|
||||
<dd>dataset entry feature</dd>
|
||||
</dl>
|
||||
<h2 id="returns">Returns</h2>
|
||||
<dl>
|
||||
<dt><code>str</code></dt>
|
||||
<dd>cleaned entry</dd>
|
||||
</dl></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.shared.entry_wise_cleansing"><code class="name flex">
|
||||
<span>def <span class="ident">entry_wise_cleansing</span></span>(<span>data: pandas.core.frame.DataFrame,<br>target_features: Collection[str],<br>cleansing_func: Callable[[str], str] = <function clean_string_slim>) ‑> tuple[pandas.core.frame.DataFrame]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def entry_wise_cleansing(
|
||||
data: DataFrame,
|
||||
target_features: Collection[str],
|
||||
cleansing_func: Callable[[str], str] = clean_string_slim,
|
||||
) -> tuple[DataFrame]:
|
||||
# apply given cleansing function to target feature
|
||||
target_features = list(target_features)
|
||||
data[target_features] = data[target_features].map(cleansing_func)
|
||||
logger.info(
|
||||
('Successfully applied entry-wise cleansing procedure >>%s<< for features >>%s<<'),
|
||||
cleansing_func.__name__,
|
||||
target_features,
|
||||
)
|
||||
return (data,)</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.shared.similar_index_connection_graph"><code class="name flex">
|
||||
<span>def <span class="ident">similar_index_connection_graph</span></span>(<span>similar_idx_pairs: Iterable[tuple[int | numpy.int64, int | numpy.int64]]) ‑> tuple[networkx.classes.graph.Graph, dict[str, float]]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def similar_index_connection_graph(
|
||||
similar_idx_pairs: Iterable[tuple[PandasIndex, PandasIndex]],
|
||||
) -> tuple[Graph, dict[str, float]]:
|
||||
# build index graph to obtain graph of connected (similar) indices
|
||||
# use this graph to get connected components (indices which belong together)
|
||||
# retain semantic connection on whole dataset
|
||||
similar_id_graph = nx.Graph()
|
||||
# for idx1, idx2 in similar_idx_pairs:
|
||||
# # inplace operation, parent/child do not really exist in undirected graph
|
||||
# update_graph(graph=similar_id_graph, parent=idx1, child=idx2)
|
||||
update_graph(graph=similar_id_graph, batch=similar_idx_pairs)
|
||||
|
||||
graph_info = get_graph_metadata(graph=similar_id_graph, logging=False)
|
||||
|
||||
return similar_id_graph, graph_info</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.shared.similar_index_groups"><code class="name flex">
|
||||
<span>def <span class="ident">similar_index_groups</span></span>(<span>similar_id_graph: networkx.classes.graph.Graph) ‑> Iterator[tuple[int | numpy.int64, ...]]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def similar_index_groups(
|
||||
similar_id_graph: Graph,
|
||||
) -> Iterator[tuple[PandasIndex, ...]]:
|
||||
# groups of connected indices
|
||||
ids_groups = cast(Iterator[set[PandasIndex]], nx.connected_components(G=similar_id_graph))
|
||||
|
||||
for id_group in ids_groups:
|
||||
yield tuple(id_group)</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
</dl>
|
||||
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|
||||
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<div class="toc">
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<ul></ul>
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|
||||
<ul id="index">
|
||||
<li><h3>Super-module</h3>
|
||||
<ul>
|
||||
<li><code><a title="lang_main.analysis" href="index.html">lang_main.analysis</a></code></li>
|
||||
</ul>
|
||||
</li>
|
||||
<li><h3><a href="#header-functions">Functions</a></h3>
|
||||
<ul class="">
|
||||
<li><code><a title="lang_main.analysis.shared.candidates_by_index" href="#lang_main.analysis.shared.candidates_by_index">candidates_by_index</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.shared.clean_string_slim" href="#lang_main.analysis.shared.clean_string_slim">clean_string_slim</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.shared.entry_wise_cleansing" href="#lang_main.analysis.shared.entry_wise_cleansing">entry_wise_cleansing</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.shared.similar_index_connection_graph" href="#lang_main.analysis.shared.similar_index_connection_graph">similar_index_connection_graph</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.shared.similar_index_groups" href="#lang_main.analysis.shared.similar_index_groups">similar_index_groups</a></code></li>
|
||||
</ul>
|
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<body>
|
||||
<main>
|
||||
<article id="content">
|
||||
<header>
|
||||
<h1 class="title">Module <code>lang_main.analysis.timeline</code></h1>
|
||||
</header>
|
||||
<section id="section-intro">
|
||||
</section>
|
||||
<section>
|
||||
</section>
|
||||
<section>
|
||||
</section>
|
||||
<section>
|
||||
<h2 class="section-title" id="header-functions">Functions</h2>
|
||||
<dl>
|
||||
<dt id="lang_main.analysis.timeline.calc_delta_to_next_failure"><code class="name flex">
|
||||
<span>def <span class="ident">calc_delta_to_next_failure</span></span>(<span>data: pandas.core.frame.DataFrame,<br>date_feature: str = 'ErstellungsDatum',<br>name_delta_feature: str = 'Zeitspanne bis zum nächsten Ereignis [Tage]',<br>convert_to_days: bool = True) ‑> pandas.core.frame.DataFrame</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def calc_delta_to_next_failure(
|
||||
data: DataFrameTLFiltered,
|
||||
date_feature: str = 'ErstellungsDatum',
|
||||
name_delta_feature: str = NAME_DELTA_FEAT_TO_NEXT_FAILURE,
|
||||
convert_to_days: bool = True,
|
||||
) -> DataFrameTLFiltered:
|
||||
data = data.copy()
|
||||
last_val = data[date_feature].iat[-1]
|
||||
shifted = data[date_feature].shift(-1, fill_value=last_val)
|
||||
data[name_delta_feature] = shifted - data[date_feature]
|
||||
data = data.sort_values(by=name_delta_feature, ascending=False)
|
||||
|
||||
if convert_to_days:
|
||||
data[name_delta_feature] = data[name_delta_feature].dt.days
|
||||
|
||||
return data</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.timeline.calc_delta_to_repair"><code class="name flex">
|
||||
<span>def <span class="ident">calc_delta_to_repair</span></span>(<span>data: pandas.core.frame.DataFrame,<br>date_feature_start: str = 'ErstellungsDatum',<br>date_feature_end: str = 'ErledigungsDatum',<br>name_delta_feature: str = 'Zeitspanne bis zur Behebung [Tage]',<br>convert_to_days: bool = True) ‑> tuple[pandas.core.frame.DataFrame]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def calc_delta_to_repair(
|
||||
data: DataFrame,
|
||||
date_feature_start: str = 'ErstellungsDatum',
|
||||
date_feature_end: str = 'ErledigungsDatum',
|
||||
name_delta_feature: str = NAME_DELTA_FEAT_TO_REPAIR,
|
||||
convert_to_days: bool = True,
|
||||
) -> tuple[DataFrame]:
|
||||
logger.info('Calculating time differences between start and end of operations...')
|
||||
data = data.copy()
|
||||
data[name_delta_feature] = data[date_feature_end] - data[date_feature_start]
|
||||
|
||||
if convert_to_days:
|
||||
data[name_delta_feature] = data[name_delta_feature].dt.days
|
||||
|
||||
logger.info('Calculation successful.')
|
||||
|
||||
return (data,)</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.timeline.cleanup_descriptions"><code class="name flex">
|
||||
<span>def <span class="ident">cleanup_descriptions</span></span>(<span>data: pandas.core.frame.DataFrame,<br>properties: Collection[str] = ('VorgangsBeschreibung', 'ErledigungsBeschreibung')) ‑> tuple[pandas.core.frame.DataFrame]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def cleanup_descriptions(
|
||||
data: DataFrame,
|
||||
properties: Collection[str] = (
|
||||
'VorgangsBeschreibung',
|
||||
'ErledigungsBeschreibung',
|
||||
),
|
||||
) -> tuple[DataFrame]:
|
||||
logger.info('Cleaning necessary descriptions...')
|
||||
data = data.copy()
|
||||
features = list(properties)
|
||||
data[features] = data[features].fillna('N.V.')
|
||||
(data,) = entry_wise_cleansing(data, target_features=features)
|
||||
logger.info('Cleansing successful.')
|
||||
|
||||
return (data.copy(),)</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.timeline.filter_activities_per_obj_id"><code class="name flex">
|
||||
<span>def <span class="ident">filter_activities_per_obj_id</span></span>(<span>data: pandas.core.frame.DataFrame,<br>activity_feature: str = 'VorgangsTypName',<br>relevant_activity_types: Iterable[str] = ('Reparaturauftrag (Portal)',),<br>feature_obj_id: str = 'ObjektID',<br>threshold_num_activities: int = 1) ‑> tuple[pandas.core.frame.DataFrame, pandas.core.series.Series]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def filter_activities_per_obj_id(
|
||||
data: DataFrame,
|
||||
activity_feature: str = 'VorgangsTypName',
|
||||
relevant_activity_types: Iterable[str] = ('Reparaturauftrag (Portal)',),
|
||||
feature_obj_id: str = 'ObjektID',
|
||||
threshold_num_activities: int = 1,
|
||||
) -> tuple[DataFrame, Series]:
|
||||
data = data.copy()
|
||||
# filter only relevant activities, count occurrences for each ObjectID
|
||||
logger.info('Filtering activities per ObjectID...')
|
||||
filt_rel_activities = data[activity_feature].isin(relevant_activity_types)
|
||||
data_filter_activities = data.loc[filt_rel_activities].copy()
|
||||
num_activities_per_obj_id = cast(
|
||||
Series, data_filter_activities[feature_obj_id].value_counts(sort=True)
|
||||
)
|
||||
# filter for ObjectIDs with more than given number of activities
|
||||
filt_below_thresh = num_activities_per_obj_id <= threshold_num_activities
|
||||
# index of series contains ObjectIDs
|
||||
obj_ids_below_thresh = num_activities_per_obj_id[filt_below_thresh].index
|
||||
filt_entries_below_thresh = data_filter_activities[feature_obj_id].isin(
|
||||
obj_ids_below_thresh
|
||||
)
|
||||
|
||||
num_activities_per_obj_id = num_activities_per_obj_id.loc[~filt_below_thresh]
|
||||
data_filter_activities = data_filter_activities.loc[~filt_entries_below_thresh]
|
||||
logger.info('Activities per ObjectID filtered successfully.')
|
||||
|
||||
return data_filter_activities, num_activities_per_obj_id</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.timeline.filter_timeline_cands"><code class="name flex">
|
||||
<span>def <span class="ident">filter_timeline_cands</span></span>(<span>data: pandas.core.frame.DataFrame,<br>cands: dict[int, tuple[tuple[int | numpy.int64, ...], ...]],<br>obj_id: int,<br>entry_idx: int,<br>sort_feature: str = 'ErstellungsDatum') ‑> pandas.core.frame.DataFrame</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def filter_timeline_cands(
|
||||
data: DataFrame,
|
||||
cands: TimelineCandidates,
|
||||
obj_id: ObjectID,
|
||||
entry_idx: int,
|
||||
sort_feature: str = 'ErstellungsDatum',
|
||||
) -> DataFrameTLFiltered:
|
||||
data = data.copy()
|
||||
cands_for_obj_id = cands[obj_id]
|
||||
cands_choice = cands_for_obj_id[entry_idx]
|
||||
data = data.loc[list(cands_choice)].sort_values(
|
||||
by=sort_feature,
|
||||
ascending=True,
|
||||
)
|
||||
|
||||
return data</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.timeline.generate_model_input"><code class="name flex">
|
||||
<span>def <span class="ident">generate_model_input</span></span>(<span>data: pandas.core.frame.DataFrame,<br>target_feature_name: str = 'nlp_model_input',<br>model_input_features: Iterable[str] = ('VorgangsTypName', 'VorgangsArtText', 'VorgangsBeschreibung')) ‑> tuple[pandas.core.frame.DataFrame]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def generate_model_input(
|
||||
data: DataFrame,
|
||||
target_feature_name: str = 'nlp_model_input',
|
||||
model_input_features: Iterable[str] = (
|
||||
'VorgangsTypName',
|
||||
'VorgangsArtText',
|
||||
'VorgangsBeschreibung',
|
||||
),
|
||||
) -> tuple[DataFrame]:
|
||||
logger.info('Generating concatenation of model input features...')
|
||||
data = data.copy()
|
||||
model_input_features = list(model_input_features)
|
||||
input_features = data[model_input_features].fillna('').astype(str)
|
||||
data[target_feature_name] = input_features.apply(
|
||||
lambda x: ' - '.join(x),
|
||||
axis=1,
|
||||
)
|
||||
logger.info('Model input generated successfully.')
|
||||
|
||||
return (data,)</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.timeline.get_timeline_candidates"><code class="name flex">
|
||||
<span>def <span class="ident">get_timeline_candidates</span></span>(<span>data: pandas.core.frame.DataFrame,<br>num_activities_per_obj_id: pandas.core.series.Series,<br>*,<br>model: sentence_transformers.SentenceTransformer.SentenceTransformer,<br>cos_sim_threshold: float,<br>feature_obj_id: str = 'ObjektID',<br>feature_obj_text: str = 'HObjektText',<br>model_input_feature: str = 'nlp_model_input') ‑> tuple[dict[int, tuple[tuple[int | numpy.int64, ...], ...]], dict[int, str]]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def get_timeline_candidates(
|
||||
data: DataFrame,
|
||||
num_activities_per_obj_id: Series,
|
||||
*,
|
||||
model: SentenceTransformer,
|
||||
cos_sim_threshold: float,
|
||||
feature_obj_id: str = 'ObjektID',
|
||||
feature_obj_text: str = 'HObjektText',
|
||||
model_input_feature: str = 'nlp_model_input',
|
||||
) -> tuple[TimelineCandidates, dict[ObjectID, str]]:
|
||||
logger.info('Obtaining timeline candidates...')
|
||||
candidates = _get_timeline_candidates_index(
|
||||
data=data,
|
||||
num_activities_per_obj_id=num_activities_per_obj_id,
|
||||
model=model,
|
||||
cos_sim_threshold=cos_sim_threshold,
|
||||
feature_obj_id=feature_obj_id,
|
||||
model_input_feature=model_input_feature,
|
||||
)
|
||||
tl_candidates = _transform_timeline_candidates(candidates)
|
||||
logger.info('Timeline candidates obtained successfully.')
|
||||
# text mapping to obtain object descriptors
|
||||
logger.info('Mapping ObjectIDs to their respective text descriptor...')
|
||||
map_obj_text = _map_obj_id_to_texts(
|
||||
data=data,
|
||||
feature_obj_id=feature_obj_id,
|
||||
feature_obj_text=feature_obj_text,
|
||||
)
|
||||
logger.info('ObjectIDs successfully mapped to text descriptors.')
|
||||
|
||||
return tl_candidates, map_obj_text</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.timeline.remove_non_relevant_obj_ids"><code class="name flex">
|
||||
<span>def <span class="ident">remove_non_relevant_obj_ids</span></span>(<span>data: pandas.core.frame.DataFrame,<br>thresh_unique_feat_per_id: int,<br>*,<br>feature_uniqueness: str = 'HObjektText',<br>feature_obj_id: str = 'ObjektID') ‑> tuple[pandas.core.frame.DataFrame]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def remove_non_relevant_obj_ids(
|
||||
data: DataFrame,
|
||||
thresh_unique_feat_per_id: int,
|
||||
*,
|
||||
feature_uniqueness: str = 'HObjektText',
|
||||
feature_obj_id: str = 'ObjektID',
|
||||
) -> tuple[DataFrame]:
|
||||
logger.info('Removing non-relevant ObjectIDs from dataset...')
|
||||
data = data.copy()
|
||||
ids_to_ignore = _non_relevant_obj_ids(
|
||||
data=data,
|
||||
thresh_unique_feat_per_id=thresh_unique_feat_per_id,
|
||||
feature_uniqueness=feature_uniqueness,
|
||||
feature_obj_id=feature_obj_id,
|
||||
)
|
||||
# only retain entries with ObjectIDs not in IDs to ignore
|
||||
data = data.loc[~(data[feature_obj_id].isin(ids_to_ignore))]
|
||||
logger.debug('Ignored ObjectIDs: %s', ids_to_ignore)
|
||||
logger.info('Non-relevant ObjectIDs removed successfully.')
|
||||
|
||||
return (data,)</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
</dl>
|
||||
</section>
|
||||
<section>
|
||||
</section>
|
||||
</article>
|
||||
<nav id="sidebar">
|
||||
<div class="toc">
|
||||
<ul></ul>
|
||||
</div>
|
||||
<ul id="index">
|
||||
<li><h3>Super-module</h3>
|
||||
<ul>
|
||||
<li><code><a title="lang_main.analysis" href="index.html">lang_main.analysis</a></code></li>
|
||||
</ul>
|
||||
</li>
|
||||
<li><h3><a href="#header-functions">Functions</a></h3>
|
||||
<ul class="">
|
||||
<li><code><a title="lang_main.analysis.timeline.calc_delta_to_next_failure" href="#lang_main.analysis.timeline.calc_delta_to_next_failure">calc_delta_to_next_failure</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.timeline.calc_delta_to_repair" href="#lang_main.analysis.timeline.calc_delta_to_repair">calc_delta_to_repair</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.timeline.cleanup_descriptions" href="#lang_main.analysis.timeline.cleanup_descriptions">cleanup_descriptions</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.timeline.filter_activities_per_obj_id" href="#lang_main.analysis.timeline.filter_activities_per_obj_id">filter_activities_per_obj_id</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.timeline.filter_timeline_cands" href="#lang_main.analysis.timeline.filter_timeline_cands">filter_timeline_cands</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.timeline.generate_model_input" href="#lang_main.analysis.timeline.generate_model_input">generate_model_input</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.timeline.get_timeline_candidates" href="#lang_main.analysis.timeline.get_timeline_candidates">get_timeline_candidates</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.timeline.remove_non_relevant_obj_ids" href="#lang_main.analysis.timeline.remove_non_relevant_obj_ids">remove_non_relevant_obj_ids</a></code></li>
|
||||
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|
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docs/lang_main/analysis/tokens.html
Normal file
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Normal file
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|
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<main>
|
||||
<article id="content">
|
||||
<header>
|
||||
<h1 class="title">Module <code>lang_main.analysis.tokens</code></h1>
|
||||
</header>
|
||||
<section id="section-intro">
|
||||
</section>
|
||||
<section>
|
||||
</section>
|
||||
<section>
|
||||
</section>
|
||||
<section>
|
||||
<h2 class="section-title" id="header-functions">Functions</h2>
|
||||
<dl>
|
||||
<dt id="lang_main.analysis.tokens.add_doc_info_to_graph"><code class="name flex">
|
||||
<span>def <span class="ident">add_doc_info_to_graph</span></span>(<span>graph: <a title="lang_main.analysis.graphs.TokenGraph" href="graphs.html#lang_main.analysis.graphs.TokenGraph">TokenGraph</a>,<br>doc: spacy.tokens.doc.Doc,<br>weight: int | None) ‑> None</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def add_doc_info_to_graph(
|
||||
graph: TokenGraph,
|
||||
doc: SpacyDoc,
|
||||
weight: int | None,
|
||||
) -> None:
|
||||
# iterate over sentences
|
||||
for sent in doc.sents:
|
||||
# iterate over tokens in sentence
|
||||
for token in sent:
|
||||
# skip tokens which are not relevant
|
||||
if not (token.pos_ in POS_OF_INTEREST or token.tag_ in TAG_OF_INTEREST):
|
||||
continue
|
||||
# skip token which are dates or times
|
||||
if token.pos_ == 'NUM' and is_str_date(string=token.text):
|
||||
continue
|
||||
|
||||
relevant_descendants = obtain_relevant_descendants(token=token)
|
||||
# for non-AUX: add parent <--> descendant pair to graph
|
||||
if token.pos_ not in POS_INDIRECT:
|
||||
for descendant in relevant_descendants:
|
||||
# add descendant and parent to graph
|
||||
update_graph(
|
||||
graph=graph,
|
||||
parent=token.lemma_,
|
||||
child=descendant.lemma_,
|
||||
weight_connection=weight,
|
||||
)
|
||||
else:
|
||||
# if indirect POS, make connection between all associated words
|
||||
combs = combinations(relevant_descendants, r=2)
|
||||
for comb in combs:
|
||||
# !! parents and children do not really exist in this case,
|
||||
# !! but only one connection is made
|
||||
update_graph(
|
||||
graph=graph,
|
||||
parent=comb[0].lemma_,
|
||||
child=comb[1].lemma_,
|
||||
weight_connection=weight,
|
||||
)</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.tokens.build_token_graph"><code class="name flex">
|
||||
<span>def <span class="ident">build_token_graph</span></span>(<span>data: pandas.core.frame.DataFrame,<br>model: spacy.language.Language,<br>*,<br>target_feature: str = 'entry',<br>weights_feature: str | None = None,<br>batch_idx_feature: str | None = 'batched_idxs',<br>build_map: bool = True,<br>batch_size_model: int = 50,<br>logging_graph: bool = True) ‑> tuple[<a title="lang_main.analysis.graphs.TokenGraph" href="graphs.html#lang_main.analysis.graphs.TokenGraph">TokenGraph</a>, dict[int | numpy.int64, spacy.tokens.doc.Doc] | None]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def build_token_graph(
|
||||
data: DataFrame,
|
||||
model: SpacyModel,
|
||||
*,
|
||||
target_feature: str = 'entry',
|
||||
weights_feature: str | None = None,
|
||||
batch_idx_feature: str | None = 'batched_idxs',
|
||||
build_map: bool = True,
|
||||
batch_size_model: int = 50,
|
||||
logging_graph: bool = True,
|
||||
) -> tuple[TokenGraph, dict[PandasIndex, SpacyDoc] | None]:
|
||||
graph = TokenGraph(enable_logging=logging_graph)
|
||||
model_input = cast(tuple[str], tuple(data[target_feature].to_list()))
|
||||
if weights_feature is not None:
|
||||
weights = cast(tuple[int], tuple(data[weights_feature].to_list()))
|
||||
else:
|
||||
weights = None
|
||||
|
||||
docs_mapping: dict[PandasIndex, SpacyDoc] | None
|
||||
if build_map and batch_idx_feature is None:
|
||||
raise ValueError('Can not build mapping if batched indices are unknown.')
|
||||
elif build_map:
|
||||
indices = cast(tuple[list[PandasIndex]], tuple(data[batch_idx_feature].to_list()))
|
||||
docs_mapping = {}
|
||||
else:
|
||||
indices = None
|
||||
docs_mapping = None
|
||||
|
||||
index: int = 0
|
||||
|
||||
for doc in tqdm(
|
||||
model.pipe(model_input, batch_size=batch_size_model), total=len(model_input)
|
||||
):
|
||||
weight: int | None = None
|
||||
if weights is not None:
|
||||
weight = weights[index]
|
||||
|
||||
add_doc_info_to_graph(
|
||||
graph=graph,
|
||||
doc=doc,
|
||||
weight=weight,
|
||||
)
|
||||
# build map if option chosen
|
||||
if indices is not None and docs_mapping is not None:
|
||||
corresponding_indices = indices[index]
|
||||
for idx in corresponding_indices:
|
||||
docs_mapping[idx] = doc
|
||||
|
||||
index += 1
|
||||
|
||||
# metadata
|
||||
graph.update_metadata()
|
||||
# convert to undirected
|
||||
graph.to_undirected(logging=False)
|
||||
graph.perform_static_analysis()
|
||||
|
||||
return graph, docs_mapping</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.tokens.is_str_date"><code class="name flex">
|
||||
<span>def <span class="ident">is_str_date</span></span>(<span>string: str, fuzzy: bool = False) ‑> bool</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def is_str_date(
|
||||
string: str,
|
||||
fuzzy: bool = False,
|
||||
) -> bool:
|
||||
"""not stable function to test strings for dates, not 100 percent reliable
|
||||
|
||||
Parameters
|
||||
----------
|
||||
string : str
|
||||
string to check for dates
|
||||
fuzzy : bool, optional
|
||||
whether to use dateutils.parser.pase fuzzy capability, by default False
|
||||
|
||||
Returns
|
||||
-------
|
||||
bool
|
||||
indicates whether date was found or not
|
||||
"""
|
||||
try:
|
||||
# check if string is a number
|
||||
# if length is greater than 8, it is not a date
|
||||
int(string)
|
||||
if len(string) not in {2, 4}:
|
||||
return False
|
||||
except ValueError:
|
||||
# not a number
|
||||
pass
|
||||
|
||||
try:
|
||||
parse(string, fuzzy=fuzzy, dayfirst=True, yearfirst=False)
|
||||
return True
|
||||
except ValueError:
|
||||
date_found: bool = False
|
||||
match = pattern_dates.search(string)
|
||||
if match is None:
|
||||
return date_found
|
||||
date_found = any(match.groups())
|
||||
return date_found</code></pre>
|
||||
</details>
|
||||
<div class="desc"><p>not stable function to test strings for dates, not 100 percent reliable</p>
|
||||
<h2 id="parameters">Parameters</h2>
|
||||
<dl>
|
||||
<dt><strong><code>string</code></strong> : <code>str</code></dt>
|
||||
<dd>string to check for dates</dd>
|
||||
<dt><strong><code>fuzzy</code></strong> : <code>bool</code>, optional</dt>
|
||||
<dd>whether to use dateutils.parser.pase fuzzy capability, by default False</dd>
|
||||
</dl>
|
||||
<h2 id="returns">Returns</h2>
|
||||
<dl>
|
||||
<dt><code>bool</code></dt>
|
||||
<dd>indicates whether date was found or not</dd>
|
||||
</dl></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.tokens.obtain_relevant_descendants"><code class="name flex">
|
||||
<span>def <span class="ident">obtain_relevant_descendants</span></span>(<span>token: spacy.tokens.token.Token) ‑> Iterator[spacy.tokens.token.Token]</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def obtain_relevant_descendants(
|
||||
token: SpacyToken,
|
||||
) -> Iterator[SpacyToken]:
|
||||
for descendant in token.subtree:
|
||||
# subtrees contain the token itself
|
||||
# if current element is token skip this element
|
||||
if descendant == token:
|
||||
continue
|
||||
|
||||
# if descendant is a date skip it)
|
||||
if is_str_date(string=descendant.text):
|
||||
continue
|
||||
|
||||
logger.debug(
|
||||
'Token >>%s<<, POS >>%s<< | descendant >>%s<<, POS >>%s<<',
|
||||
token,
|
||||
token.pos_,
|
||||
descendant,
|
||||
descendant.pos_,
|
||||
)
|
||||
|
||||
# eliminate cases of cross-references with verbs
|
||||
if (token.pos_ == 'AUX' or token.pos_ == 'VERB') and (
|
||||
descendant.pos_ == 'AUX' or descendant.pos_ == 'VERB'
|
||||
):
|
||||
continue
|
||||
# skip cases in which descendant is indirect POS with others than verbs
|
||||
elif descendant.pos_ in POS_INDIRECT:
|
||||
continue
|
||||
# skip cases in which child has no relevant POS or TAG
|
||||
elif not (descendant.pos_ in POS_OF_INTEREST or descendant.tag_ in TAG_OF_INTEREST):
|
||||
continue
|
||||
|
||||
yield descendant
|
||||
|
||||
# TODO look at results and fine-tune function accordingly</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
<dt id="lang_main.analysis.tokens.pre_clean_word"><code class="name flex">
|
||||
<span>def <span class="ident">pre_clean_word</span></span>(<span>string: str) ‑> str</span>
|
||||
</code></dt>
|
||||
<dd>
|
||||
<details class="source">
|
||||
<summary>
|
||||
<span>Expand source code</span>
|
||||
</summary>
|
||||
<pre><code class="python">def pre_clean_word(string: str) -> str:
|
||||
pattern = r'[^A-Za-zäöüÄÖÜ]+'
|
||||
string = re.sub(pattern, '', string)
|
||||
|
||||
return string</code></pre>
|
||||
</details>
|
||||
<div class="desc"></div>
|
||||
</dd>
|
||||
</dl>
|
||||
</section>
|
||||
<section>
|
||||
</section>
|
||||
</article>
|
||||
<nav id="sidebar">
|
||||
<div class="toc">
|
||||
<ul></ul>
|
||||
</div>
|
||||
<ul id="index">
|
||||
<li><h3>Super-module</h3>
|
||||
<ul>
|
||||
<li><code><a title="lang_main.analysis" href="index.html">lang_main.analysis</a></code></li>
|
||||
</ul>
|
||||
</li>
|
||||
<li><h3><a href="#header-functions">Functions</a></h3>
|
||||
<ul class="">
|
||||
<li><code><a title="lang_main.analysis.tokens.add_doc_info_to_graph" href="#lang_main.analysis.tokens.add_doc_info_to_graph">add_doc_info_to_graph</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.tokens.build_token_graph" href="#lang_main.analysis.tokens.build_token_graph">build_token_graph</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.tokens.is_str_date" href="#lang_main.analysis.tokens.is_str_date">is_str_date</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.tokens.obtain_relevant_descendants" href="#lang_main.analysis.tokens.obtain_relevant_descendants">obtain_relevant_descendants</a></code></li>
|
||||
<li><code><a title="lang_main.analysis.tokens.pre_clean_word" href="#lang_main.analysis.tokens.pre_clean_word">pre_clean_word</a></code></li>
|
||||
</ul>
|
||||
</li>
|
||||
</ul>
|
||||
</nav>
|
||||
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|
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<footer id="footer">
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||||
<p>Generated by <a href="https://pdoc3.github.io/pdoc" title="pdoc: Python API documentation generator"><cite>pdoc</cite> 0.11.5</a>.</p>
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|
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|
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Reference in New Issue
Block a user